Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Regulation Of Rna Metabolic Process (GO:0051252) Genes Targeted by hsa-mir-140-3p in GLB Brain Sun Cluster 8 Table contains all genes in the GLB Brain Sun cluster number 8. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-140-3p GO:0051252 9692 KIAA0391 KIAA0391 [Source:HGNC Symbol;Acc:19958] zzz999 196528 ARID2 AT rich interactive domain 2 (ARID, RFX-like) [Source:HGNC Symbol;Acc:18037] P T Yes 10518 CIB2 calcium and integrin binding family member 2 [Source:HGNC Symbol;Acc:24579] T 57474 ZNF490 zinc finger protein 490 [Source:HGNC Symbol;Acc:23705] T Yes 56478 EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:16687] T 84441 MAML2 mastermind-like 2 (Drosophila) [Source:HGNC Symbol;Acc:16259] P T Yes 124790 HEXIM2 hexamthylene bis-acetamide inducible 2 [Source:HGNC Symbol;Acc:28591] zzz999 Yes 5087 PBX1 pre-B-cell leukemia homeobox 1 [Source:HGNC Symbol;Acc:8632] zzz999 Yes 7024 TFCP2 transcription factor CP2 [Source:HGNC Symbol;Acc:11748] T Yes 6671 SP4 Sp4 transcription factor [Source:HGNC Symbol;Acc:11209] P T Yes 57680 CHD8 chromodomain helicase DNA binding protein 8 [Source:HGNC Symbol;Acc:20153] zzz999 Yes 80095 ZNF606 zinc finger protein 606 [Source:HGNC Symbol;Acc:25879] zzz999 Yes 79736 C17orf42 chromosome 17 open reading frame 42 [Source:HGNC Symbol;Acc:26223] zzz999 90378 zzz999 zzz999 zzz999 84924 ZNF566 zinc finger protein 566 [Source:HGNC Symbol;Acc:25919] zzz999 Yes 56261 GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26957] P T 466 ATF1 activating transcription factor 1 [Source:HGNC Symbol;Acc:783] zzz999 Yes 6777 STAT5B signal transducer and activator of transcription 5B [Source:HGNC Symbol;Acc:11367] T Yes 5813 PURA purine-rich element binding protein A [Source:HGNC Symbol;Acc:9701] P T Yes 57563 KLHL8 kelch-like 8 (Drosophila) [Source:HGNC Symbol;Acc:18644] zzz999 8536 CAMK1 calcium/calmodulin-dependent protein kinase I [Source:HGNC Symbol;Acc:1459] zzz999 10988 METAP2 methionyl aminopeptidase 2 [Source:HGNC Symbol;Acc:16672] P T 5425 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Source:HGNC Symbol;Acc:9176] zzz999 139818 DOCK11 dedicator of cytokinesis 11 [Source:HGNC Symbol;Acc:23483] zzz999 79091 METTL22 methyltransferase like 22 [Source:HGNC Symbol;Acc:28368] zzz999 23389 MED13L mediator complex subunit 13-like [Source:HGNC Symbol;Acc:22962] zzz999 Yes 9037 SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:HGNC Symbol;Acc:10736] T 6599 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 [Source:HGNC Symbol;Acc:11104] P T Yes 11174 ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:HGNC Symbol;Acc:222] T 23369 PUM2 pumilio homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:14958] zzz999 51106 TFB1M transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:17037] zzz999 65264 UBE2Z ubiquitin-conjugating enzyme E2Z [Source:HGNC Symbol;Acc:25847] zzz999 2176 FANCC Fanconi anemia, complementation group C [Source:HGNC Symbol;Acc:3584] T 56127 PCDHB10 protocadherin beta 10 [Source:HGNC Symbol;Acc:8681] zzz999 11237 RNF24 ring finger protein 24 [Source:HGNC Symbol;Acc:13779] T 130271 PLEKHH2 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:HGNC Symbol;Acc:30506] T 6787 NEK4 NIMA (never in mitosis gene a)-related kinase 4 [Source:HGNC Symbol;Acc:11399] zzz999 23512 SUZ12 suppressor of zeste 12 homolog (Drosophila) [Source:HGNC Symbol;Acc:17101] P T Yes 11252 PACSIN2 protein kinase C and casein kinase substrate in neurons 2 [Source:HGNC Symbol;Acc:8571] zzz999 256987 SERINC5 serine incorporator 5 [Source:HGNC Symbol;Acc:18825] zzz999 163071 ZNF114 zinc finger protein 114 [Source:HGNC Symbol;Acc:12894] zzz999 Yes 3070 HELLS helicase, lymphoid-specific [Source:HGNC Symbol;Acc:4861] zzz999 Yes 9702 CEP57 centrosomal protein 57kDa [Source:HGNC Symbol;Acc:30794] zzz999 1911 PHC1 polyhomeotic homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:3182] zzz999 57591 MKL1 megakaryoblastic leukemia (translocation) 1 [Source:HGNC Symbol;Acc:14334] zzz999 23118 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 [Source:HGNC Symbol;Acc:17075] P T Yes 10983 CCNI cyclin I [Source:HGNC Symbol;Acc:1595] zzz999 89796 NAV1 neuron navigator 1 [Source:HGNC Symbol;Acc:15989] P T 23024 PDZRN3 PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:17704] zzz999 7586 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 [Source:HGNC Symbol;Acc:13101] zzz999 Yes 284058 KIAA1267 KIAA1267 [Source:HGNC Symbol;Acc:24565] P T 143282 FGFBP3 fibroblast growth factor binding protein 3 [Source:HGNC Symbol;Acc:23428] zzz999 1840 DTX1 deltex homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:3060] zzz999 84838 ZNF496 zinc finger protein 496 [Source:HGNC Symbol;Acc:23713] zzz999 Yes 63897 HEATR6 HEAT repeat containing 6 [Source:HGNC Symbol;Acc:24076] zzz999 65244 SPATS2 spermatogenesis associated, serine-rich 2 [Source:HGNC Symbol;Acc:18650] zzz999 57510 XPO5 exportin 5 [Source:HGNC Symbol;Acc:17675] zzz999 23360 FNBP4 formin binding protein 4 [Source:HGNC Symbol;Acc:19752] zzz999 374354 NHLRC2 NHL repeat containing 2 [Source:HGNC Symbol;Acc:24731] zzz999 27183 VPS4A vacuolar protein sorting 4 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:13488] zzz999 9921 RNF10 ring finger protein 10 [Source:HGNC Symbol;Acc:10055] T Yes 1499 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa [Source:HGNC Symbol;Acc:2514] zzz999 Yes 6297 SALL2 sal-like 2 (Drosophila) [Source:HGNC Symbol;Acc:10526] zzz999 Yes 200765 TIGD1 tigger transposable element derived 1 [Source:HGNC Symbol;Acc:14523] zzz999 23452 ANGPTL2 angiopoietin-like 2 [Source:HGNC Symbol;Acc:490] zzz999 8841 HDAC3 histone deacetylase 3 [Source:HGNC Symbol;Acc:4854] zzz999 Yes 79915 ATAD5 ATPase family, AAA domain containing 5 [Source:HGNC Symbol;Acc:25752] zzz999 4038 LRP4 low density lipoprotein receptor-related protein 4 [Source:HGNC Symbol;Acc:6696] T 3234 HOXD8 homeobox D8 [Source:HGNC Symbol;Acc:5139] zzz999 Yes 25885 POLR1A polymerase (RNA) I polypeptide A, 194kDa [Source:HGNC Symbol;Acc:17264] zzz999 55728 N4BP2 NEDD4 binding protein 2 [Source:HGNC Symbol;Acc:29851] zzz999 8125 ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:HGNC Symbol;Acc:13233] zzz999 7627 ZNF75A zinc finger protein 75a [Source:HGNC Symbol;Acc:13146] T Yes 79258 MMEL1 membrane metallo-endopeptidase-like 1 [Source:HGNC Symbol;Acc:14668] zzz999 50515 CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 [Source:HGNC Symbol;Acc:17422] zzz999 91012 LASS5 LAG1 homolog, ceramide synthase 5 [Source:HGNC Symbol;Acc:23749] zzz999 Yes 56947 MFF mitochondrial fission factor [Source:HGNC Symbol;Acc:24858] zzz999 147929 ZNF565 zinc finger protein 565 [Source:HGNC Symbol;Acc:26726] zzz999 Yes 220382 FAM181B family with sequence similarity 181, member B [Source:HGNC Symbol;Acc:28512] zzz999 54665 RSBN1 round spermatid basic protein 1 [Source:HGNC Symbol;Acc:25642] zzz999 64410 KLHL25 kelch-like 25 (Drosophila) [Source:HGNC Symbol;Acc:25732] T 4163 MCC mutated in colorectal cancers [Source:HGNC Symbol;Acc:6935] zzz999 79892 MCMBP minichromosome maintenance complex binding protein [Source:HGNC Symbol;Acc:25782] zzz999 143458 LDLRAD3 low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:27046] zzz999 22846 VASH1 vasohibin 1 [Source:HGNC Symbol;Acc:19964] zzz999 84307 ZNF397 zinc finger protein 397 [Source:HGNC Symbol;Acc:18818] zzz999 Yes 55285 RBM41 RNA binding motif protein 41 [Source:HGNC Symbol;Acc:25617] zzz999 9330 GTF3C3 general transcription factor IIIC, polypeptide 3, 102kDa [Source:HGNC Symbol;Acc:4666] T 7699 ZNF140 zinc finger protein 140 [Source:HGNC Symbol;Acc:12925] zzz999 Yes 9889 ZBED4 zinc finger, BED-type containing 4 [Source:HGNC Symbol;Acc:20721] zzz999 10120 ACTR1B ARP1 actin-related protein 1 homolog B, centractin beta (yeast) [Source:HGNC Symbol;Acc:168] T 1404 HAPLN1 hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:2380] zzz999 146050 ZSCAN29 zinc finger and SCAN domain containing 29 [Source:HGNC Symbol;Acc:26673] T Yes 55857 zzz999 zzz999 zzz999 90141 EFCAB11 EF-hand calcium binding domain 11 [Source:HGNC Symbol;Acc:20357] zzz999 348327 ZNF530 zinc finger protein 530 [Source:HGNC Symbol;Acc:29297] zzz999 Yes 84869 CBR4 carbonyl reductase 4 [Source:HGNC Symbol;Acc:25891] zzz999 222663 SCUBE3 signal peptide, CUB domain, EGF-like 3 [Source:HGNC Symbol;Acc:13655] T 9562 MINPP1 multiple inositol-polyphosphate phosphatase 1 [Source:HGNC Symbol;Acc:7102] T 525 ATP6V1B1 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 [Source:HGNC Symbol;Acc:853] zzz999 11157 LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17017] zzz999 9786 KIAA0586 KIAA0586 [Source:HGNC Symbol;Acc:19960] zzz999 81493 SYNC syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:28897] P T 5096 PCCB propionyl CoA carboxylase, beta polypeptide [Source:HGNC Symbol;Acc:8654] zzz999 6944 VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:11644] zzz999 Yes 57727 NCOA5 nuclear receptor coactivator 5 [Source:HGNC Symbol;Acc:15909] T 284306 ZNF547 zinc finger protein 547 [Source:HGNC Symbol;Acc:26432] zzz999 Yes 10565 ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) [Source:HGNC Symbol;Acc:15772] zzz999 55500 ETNK1 ethanolamine kinase 1 [Source:HGNC Symbol;Acc:24649] P T 80824 DUSP16 dual specificity phosphatase 16 [Source:HGNC Symbol;Acc:17909] zzz999 51300 C3orf1 chromosome 3 open reading frame 1 [Source:HGNC Symbol;Acc:1321] T 54675 CRLS1 cardiolipin synthase 1 [Source:HGNC Symbol;Acc:16148] zzz999 124402 FAM100A family with sequence similarity 100, member A [Source:HGNC Symbol;Acc:29576] zzz999

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